Gaoyang Luo's repositories
CompRanking
Metagenomic resistome risk ranking pipeline. It can comprehensively ranking the antimicrobial resistance risk of environmental metagenomic samples, also known as CompRanking.
ARGrankerTutorial
An tutorial for arg_ranker and tell the users how to gain the desired result step by step.
DeepLearning-500-questions
深度学习500问，以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述，以帮助自己及有需要的读者。 全书分为18个章节，50余万字。由于水平有限，书中不妥之处恳请广大读者批评指正。 未完待续............ 如有意合作，联系scutjy2015@163.com 版权所有，违权必究 Tan 2018.06
bioinformatics-snakemake-pipelines
Collection of Snakemake pipeline for commin bioinformatics tasks
bioinformatics-tools
Here includes a lot of practical bioinformatics tools for members of GMC to use
CLMB
Contrastive Learning for Metagenomic Binning
coatnet-pytorch
A PyTorch implementation of "CoAtNet: Marrying Convolution and Attention for All Data Sizes"
Plastisphere_AMR_data_analysis
R code for data analysis
ppr_practice
This script can help you comlete projection-pursuit regression.
esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
GaoyangLuo.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
ictv-taxdump
NCBI-style taxdump files for International Committee on Taxonomy of Viruses (ICTV)
Machine-Learning-Collection
A resource for learning about Machine learning & Deep Learning
palm_annot
Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences
plascad
Plascad is a computationally efficient tool designed for plasmids classification, antibiotic resistance genes (ARGs) annotation and plasmid visualization.
PyTorch-Tutorial
Build your neural network easy and fast, 莫烦Python中文教学
pytorch-tutorial-xiaotutui
PyTorch深度学习快速入门教程（绝对通俗易懂！）
Pytorch_QuickTutorial
Introductory to pytorch, including configeration, classical model (CNN, LSTM, BERT, Transformer) and demo practise.
PyTorch_Tutorial
《Pytorch模型训练实用教程》中配套代码
RdRp-scan
Exploring the "dusk matter" of the RNA virosphere
Reinforcement_Learning_Tutorial
This repo includes the code about my study on reinforcement. It will last four months update in total.
seekr
A library for counting small kmer frequencies in nucleotide sequences.
skills
个人的技能树仓库，主要包含个人机器学习以及深度学习的笔记