GELOG's repositories
docker-ubuntu-hbase
Dockerfile for running HBase on Ubuntu
docker-ubuntu-adam
(Genomics) Dockerfile for running Adam - http://bdgenomics.org
1kg-metadata
1000 Genome Project Metadata
docker-ubuntu-avocado
(Genomics) Dockerfile for running Avocado - http://bdgenomics.org
docker-ubuntu-java
Java Dockerfile for trusted automated Docker builds.
docker-ubuntu-scala
Dockerfile for running Scala on Ubuntu
example-avro-parquet-spark
Ce projet est un exemple démontrant premièrement comment convertir un fichier Avro en classes Java. Ensuite ce projet montre comment persister des données à l'aide de Parquet. Pour terminer, ce projet démontre comment sélectionner des données depuis les fichiers Parquets à l'aide de Spark.
genomic-projects
Repository for all Genomic Projects
optithera-scripts
Various scripts developed for the Opti-Thera project at the CRCHUM
variantminer
A web UI over genomic data
bdg-formats
Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.
docker-ubuntu-snap
(Genomics) Dockerfile for running Snap (Scalable Nucleotide Alignment Program) - http://snap.cs.berkeley.edu/
mononews-backend
Backend of the Mononews application: www.mononews.ca
plink-ng
A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Future development will revolve around critical extensions to the core file format (multiallelic variants, dosage, phase).
sample-hbase-app
Sample Java application that communicates with HBase via the HBase API.