Fraternali Lab

sciCSR

Single-Cell Inference of Class Switch Recombination

POPScomp

Solvent Accessible Surface Areas of Biomolecules and their Complexes

VCAb

V and C region bearing antibody database

AlloHubPy

Python version for the AllohubMat analysis

BrepConvert

Analyse gene conversion events in immunoglobulin sequences

ImmunoMatch

ImmunoMatch for predicting cognate pairing between immunoglobulin heavy and light chains

POPSlegacy

POPS*: solvent accessible surface areas (SASAs) of proteins and nucleic acids

BrepPhylo

phylogenetic reconstruction of BCR lineages

netfeat

analysis of network features

PDBencode

Encodes PDB structures into Structural Alphabet sequences

RESPECTEx

Reconstituting Specific Cell-type Expression

5BBB0226_Protein_Modelling_Tutorial

ALLOHUBMAT

Detection of Allosteric Hub Residues

allosterome

Allosterome project

BrepPhyloAnalysis

Analysis for the BrepPhylo paper on COVID, Ebola and RSV repertoires

CompAllo

Open source material of CECAM workshop CompAllo, 09-11.04.2018 in Lausanne

DCDencode

Encode DCD trajectory into Structural Alphabet sequences

Fraternalilab.github.io

Fraternali Lab

Hackathon_Summer2019

Code challenges for summer students

HOIP-ensembles-Kausas-et-al

Supplementary data and code for "Characterisation of HOIP RBR E3 ligase conformational dynamics using integrative modelling".

IL1-InhibitorsScreening

obscurinDB

Database of obscurin single amino-acid variants and mapping to sequence and structural information

POPSCOMPlegacy

Analysis of biomolecular complex interfaces

scRNAVeloQuant

TrajSAencode

Python version of the SA encoding method

TW-Materials

ANARCI_vc

Antibody Numbering for both v and c region

MDanalysisTutorial

A simple GitHub package designed to teach the fundamentals of MD analysis using python

PIFS

Protein Interface Fingerprinting with Subgraphs

sciCSR-analysis

analysis scripts in the Ng et al. sciCSR paper