KYY's starred repositories
pytorch_geometric
Graph Neural Network Library for PyTorch
python_for_microscopists
https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1
arxiv-style
A Latex style and template for paper preprints (based on NIPS style)
pymol-open-source
Open-source foundation of the user-sponsored PyMOL molecular visualization system.
numerical-veliz
Numerical Analysis code from the Oscar Veliz YouTube Channel
graph_datasets
Data for "Understanding Isomorphism Bias in Graph Data Sets" paper.
networkx-guide
We here are very big fans of NetworkX as a graph library and its comprehensive set of graph algorithms. For many though, working with NetworkX involves a steep learning curve. This guide is designed as an aid for beginners and experienced users to find specific tips and explore the world of complex networks.
GNN-ART-LABEL
Code and dataset for the MICCAI 2020 paper: Automated Intracranial Artery Labeling using a Graph Neural Network and Hierarchical Refinement
ml-cookbook
Machine learning notebooks and code used for demonstration purposes
ImageJMacro_Introduction
A first intoduction to scripting in Fiji using the ImageJ Macro language.
introduction-to-epidemics
An introduction to epidemic modelling in its various guises
Applying-DRL-to-HP-Model-for-Protein-Structure-Prediction
Source code and dataset for 2022 Publication "Applying Deep Reinforcement Learning to the HP Model for Protein Structure Prediction"
you-me-and-uaf
Use-After-Free Examples
Molecular_Dynamics
Simulated annealing and replica exchange implementation in Python and using NumPy library