Ferguson Lab at the University of Chicago's repositories
DiAMoNDBack
DiAMoNDBack: Diffusion-denoising Autoregressive Model for Non-Deterministic Backmapping of Cα Protein Traces
activeLearningPFASLinear
Data-driven discovery of linear molecular probes with optimal selective affinity for PFAS in water
integrin_molgen
Deep generative modeling of large multi-molecular systems
mdn_propagator
Mixture Density Networks (MDNs) for learning simulation propagators
ChromSTEM-Denoising-Autoencoder
A denoising autoencoder using convolutional neural networks and molecular dynamics simulations to post-process ChromSTEM images and provide nucleosome-level resolution.
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