FabianDK / LongeviTE

Analysis of transposable elements in Drosophila populations selected for longevity through postponed reproduction

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Transposable element landscape in Drosophila populations selected for longevity

Analysis of transposable elements in Drosophila melanogaster populations selected for longevity through postponed reproduction.

Manuscript on bioRxiv: https://www.biorxiv.org/content/10.1101/867838v1

Additional output files on dryad: https://doi.org/10.5061/dryad.s7h44j13r

Contact: daniel.fabian@ebi.ac.uk

Manual:

  1. Please run scripts in the correct order (see number labels).
  2. Adjust folder names and paths to fit your system.
  3. All text ouputs are in the folder output_files. Most of these results are already in the supplementary material. Outputs not present on GitHub or in the supplementary material are available on dryad (doi:10.5061/dryad.s7h44j13r).
  4. To run R scripts, please make sure custom functions in R_functions.R are loaded.

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Analysis of transposable elements in Drosophila populations selected for longevity through postponed reproduction


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