FCP-INDI

FCP-INDI

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FCP-INDI's repositories

C-PAC

Configurable Pipeline for the Analysis of Connectomes

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cpac

A convenience wrapper for https://github.com/FCP-INDI/C-PAC that provides a simple command line interface.

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C-PAC_templates

Templates and atlases that aren't included in Neuroparc and are packaged in C-PAC

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fcp-indi.github.io

Github Pages Repo for FCP-INDI

awesoMRI-QC

A curated list of measures, tools, and references for MRI quality control (QC).

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C-PAC_GUI

A new GUI for C-PAC

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C-PAC_tutorials

Tutorials for C-PAC

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cpac_outputs_to_bids

Configurable script to convert CPAC outputs to BIDS format, greatly reduces the amount of storage needed for outputs, and works with BIDS APPS!

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cpac_run_logs

Repository for information about C-PAC runs.

indi_bidsification

Scripts related to the process of converting INDI datasets into BIDS format.

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nki-rs-preproc

C-PAC configuration YAMLs and other resources for preprocessing the NKI-RS.

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hpc_benchmark

Your friendly neighborhood lightweight utility for monitoring resource usage of your pipelines and analyses.

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reg-suite

regression testing suite built for C-PAC

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.github

This repository houses default community health files for GitHub repositories for the 1000 Functional Connectomes Project, the International Neuroimaging Data-Sharing Initiative and the Computational Neuroimaging Lab at the Child Mind Institute.

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app-C-PAC-brainlife.io

This is the official C-PAC (Configurable Pipeline for the Analysis of Connectomes) brainlife.io app. Currently this app runs either the default pipeline or one of our preconfigured pipelines.

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C-PAC_regression_dashboard

Dashboard for C-PAC regression suite correlations

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ciftify

The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets

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fcp_indi_bucket_maintenance

Scripts, how tos, FAQs, and issues related to maintaining the FCP-INDI public S3 bucket.

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INDI-Tools

Utilities developed for interaction with the AWS cloud

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nki-rs-webpages

Webpages for the NKI RS Enhanced Website

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regtest-runlogs

Repository of logs from remote regression test runs

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rocklandsample

Tools for interacting with Rockland Sample data in the AWS cloud.

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s3-webpages

Documentation for the FCP-INDI AWS S3 bucket.

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slurm_testing

TEMPORARY FORK FOR TESTING

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theodore

A C-PAC utility.

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TheWay

Boilerplate scripts for running workflows on Penn clusters

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