Lotfi Slim (EpiSlim)

EpiSlim

Geek Repo

Company:Nvidia

Location:London, UK

Twitter:@EpiSlim

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Lotfi Slim's repositories

kernelPSI

Nonlinear post-selection inference

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epiGWAS

Causal inference for interaction detection

WHInter

Brand and Bound for Interaction detection

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biglasso

biglasso: Extending Lasso Model Fitting to Big Data in R

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bonito

Bonito - A PyTorch Basecaller for Oxford Nanopore Reads

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Clair3

Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

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deepconsensus

DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.

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dorado

A LibTorch Basecaller for Oxford Nanopore Reads

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GenomeWorks

SDK for GPU accelerated genome assembly and analysis

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regenie

regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.

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sgkit

Statistical genetics toolkit

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