EdwardZX

EdwardZhangX's repositories

RoseTTAFold

This package contains deep learning models and related scripts for RoseTTAFold

Language:PythonMIT100

scGNN

scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks

Language:PythonMIT100

TrackMate

TrackMate is your buddy for your everyday tracking.

Language:Java100

Trajectron

Code accompanying "The Trajectron: Probabilistic Multi-Agent Trajectory Modeling with Dynamic Spatiotemporal Graphs" by Boris Ivanovic and Marco Pavone.

Language:Jupyter NotebookMIT100

transdim

Machine learning for transportation data imputation and prediction.

Language:Jupyter NotebookMIT100

andi_datasets

ANDI provides the necessary functions to generate, save, load and manipulate datasets of diffusion anomalous trajectories. It is part of the Anomalous Diffusion (ANDI) Challenge.

Language:Jupyter NotebookMIT000

bayeSDE

Code for "Infinitely Deep Bayesian Neural Networks with Stochastic Differential Equations"

MIT000

cresp

Code for 'On Contrastive Representations of Stochastic Processes' https://arxiv.org/abs/2106.10052

MIT000

DAODEN

Implementation of Data-Assimilation-based ODE Network (DAODEN) (https://arxiv.org/abs/2009.02296)

NOASSERTION000

deepmd-kit

A deep learning package for many-body potential energy representation and molecular dynamics

LGPL-3.0000

DSARF

DSARF: Deep Switching Auto-Regressive Factorization: Application to Time Series Forecasting (AAAI2021)

000

A software tool implementing the viscous rigid body mechanics for multi-cellular modelling, including the models used in the paper "A rigid body framework for multi-cellular modelling" by Brown et al.

GPL-3.0000