Dreemurr-T / CDPfold

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5sRNA secondary structure prediction process

1.data_pre_treatment.py----------------------------->Data preprocessing(Extract sequence and structure data)

2.data_select_5s_seq.py/data_select_5s_stru.py------>Pick out 5sRNA data

3.train_to_labelpng.py------------------------------>RNA representation and sliding window algorithm

4.trainning_data_standarding.py--------------------->Data normalization

5.base_balance.py----------------------------------->Balanced data

6.input.py/model.py--------------------------------->Convolutional neural network input and model

7.trainning.py-------------------------------------->Training model

8.validation.py------------------------------------->Validation model

9.test.py------------------------------------------->Test model

General RNA secondary structure prediction process

1.delete_pseudoknot.py------------------------------>Delete pseudoknot data

2.data_pre_treatment.py----------------------------->Data preprocessing(Extract sequence and structure data)

3.train_to_labelpng.py------------------------------>RNA representation and sliding window algorithm

4.trainning_data_standarding.py--------------------->Data normalization

5.base_balance.py----------------------------------->Balanced data

6.input.py/model.py--------------------------------->Convolutional neural network input and model

7.trainning.py-------------------------------------->Training model

8.validation.py------------------------------------->Validation model

9.test.py------------------------------------------->Test model

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