DnlRKorn's repositories
aragorn
A Translator ARA combining asynchronous database querying, answer coalescence, and answer ranking.
CHEMBL_Targets_RelatedTo_Molecule
Simple jupyter notebook for querying CHEMBL database. Allows user to pass CHEMBL idx to function and get all targets related to said identifier. Further functions leverage existing CHEMBL APIs to gain more information on targets.
ClinicalTrialConditionsToOntologies
A repository for the work in getting presently unmapped condition strings present in ClinicalTrials.gov data to be more fully represented in existing ontology work.
CORD19
Annotated Data for the COVID-19 Open Research Dataset Challenge
dash-jsme
Get started creating your own Dash components here.
mondo
Mondo Disease Ontology
neo4j
Graphs for Everyone
ontology-access-kit
Ontology Access Kit: A python library and command line application for working with ontologies
promiscuity-procedure
Boilerplate code for building Procedures for Neo4j 3.0+
py2cytoscape
Python utilities for Cytoscape and Cytoscape.js
rbo
Implementation of Rank-biased Overlap
robokop
Master UI for ROBOKOP
standardized-semantic-odorant-profiles
A collection of files and data for the paper "Novel Classification of Monomolecular Odorants using Standardized Semantic Profiles" from Thieme et al.
upheno
The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
xDTD_training_pipeline
This repo is created for hosting a pipeline for automatically training xDTD model.