Dimas263 / NLP_NER_CRF_Named_Entity_Recognition

NLP Named Entity Recognition dalam bidang Biomedis, mendeteksi teks dan membuat klasifikasi apakah teks tersebut mempunyai entitas plant atau disease, memberi label pada teks, menguji hubungan entitas plant dan disease, menilai kecocokan antara kedua entitas, membandingkan hasil uji dengan menggunakan models CRF

NLP

Named Entity Recognition (NER) - CRF

Slamet Riyanto S.Kom., M.M.S.I.

Dimas Dwi Putra

Architecture

Dataset
View Dataset .csv

Sentence #	Word	POS	Tag
Sentence: 0	studies	NNS	O
Sentence: 0	on	IN	O
Sentence: 0	magnesium	NN	O
Sentence: 0	s	NN	O
Sentence: 0	mechanism	NN	O
Sentence: 0	of	IN	O
Sentence: 0	action	NN	O
Sentence: 0	in	IN	O
Sentence: 0	digitalis	NN	B-plant
Sentence: 0	induced	VBD	O
Sentence: 0	arrhythmias	NNS	B-disease
...

Eval

Entities	precision	recall	f1-score	support	time
Disease	0,776	0,648	0,706	219	0.00.13
Plant	0,841	0,851	0,846	168
micro avg	0,807	0,736	0,770	387
macro avg	0,809	0,750	0,776	387
weighted avg	0,804	0,736	0,767	387
F-1 Scores			77%

Predict

Top positive:
4.842843 plant    word.lower():garlic
4.709949 plant    word.lower():onion
4.073929 disease  word.lower():toxicity
4.054944 plant    word.lower():coriander
4.027413 disease  word.lower():fracture
3.990277 plant    word.lower():pomegranate
3.653315 plant    word.lower():cannabis
3.653315 plant    word[-3:]:bis
3.576833 disease  word.lower():malignancies
3.425418 plant    word.lower():wheat
3.279002 plant    word.lower():soybean
3.225197 plant    word.lower():pecan
3.170079 disease  word.lower():hypertension
3.148002 disease  word.lower():tumors
3.122960 plant    word[-3:]:lis
3.075669 plant    +1:word.lower():oil
3.048397 disease  word.lower():diabetic
3.013212 disease  +1:word.lower():cavity
2.998055 disease  word.lower():allergy
2.995630 plant    word[-3:]:rry
2.992128 disease  word.lower():cataract
2.981014 disease  word.lower():bleeding
2.979117 disease  word.lower():cancer
2.978557 disease  word.lower():tuberculosis
2.965201 O        word.lower():apoptosis
2.927497 disease  word[-2:]:dm
2.881254 disease  word.lower():cancers
2.833302 O        word.lower():virus
2.810619 disease  word.lower():diabetes
2.798214 plant    +1:word.lower():edulis

Top negative:
-3.359532 O        word.lower():onion
-3.066623 O        -1:word.lower():amounts
-2.745636 O        word.lower():hypertension
-2.708038 O        word.lower():soybean
-2.644523 O        word.lower():wheat
-2.623507 O        word.lower():diabetic
-2.338203 O        word.lower():tumors
-2.152337 O        -1:word.lower():neoplasia
-2.130136 O        word.lower():onions
-2.130066 O        word.lower():wheezing
-2.118473 O        word[-2:]:za
-2.094815 O        +1:word.lower():specimens
-2.090329 O        word[-2:]:ra
-2.073248 O        -1:word.lower():therapy
-2.055149 O        word[-2:]:ia
-2.020333 O        word[-2:]:go
-2.011253 O        word.lower():garlic
-1.958288 O        +1:word.lower():korean
-1.946295 O        word.lower():cancers
-1.893636 disease  -1:word.lower():tumors
-1.880753 O        word.lower():soreness
-1.869144 O        word[-2:]:na
-1.867619 O        word.lower():cytotoxicity
-1.836304 O        word[-3:]:oes
-1.826616 disease  -1:word.lower():diseases
-1.777637 O        word[-2:]:oa
-1.766677 O        word[-2:]:ae
-1.765827 O        word.lower():intestinal
-1.751468 O        word.lower():occlusion
-1.743117 O        word[-3:]:nut

Other Content

Websites Prediction

1. Django Websites Prediction For NER dan RE

Named Entity Recognition (NER)

1. NER Dataset Biomedical Plant-Disease Corpus

2. NER CRF Named Entity Recognition

3. NER BiLSTM Named Entity Recognition

4. NER BERT Named Entity Recognition

5. NER BiLSTM CRF Named Entity Recognition

6. NER BERT BiLSTM CRF Named Entity Recognition

Relation Extraction (RE)

1. RE Dataset Biomedical Plant-Disease Corpus

2. RE BERT Relation Extraction Biomedical

3. RE BiLSTM CRF Relation Extraction Biomedical