Dienofail

BoL

BoL scripts

DP_slice_sampling

Ipython notebook and scripts for splice sampling of MDPs from Walker 2007

LuaAssemblyTools

Lua Assembly/Bytecode Tools. Has functions for virtually all aspects of LASM, including reading/writing, verifying, stripping debug info, LASM decompilation, and LASM parsing.

CDR3_Project

Source code dealing with categorization of CDR3 DNA sequences into V/D/J components

Decombinator

Fast, efficient tool for analysis of T cell receptor repertoires

hanbot

Hanbot scripts

migec

Molecular identifier group-based error correction pipeline

CourseraML

I'm taking Andrew Ng's Machine Learning course on Coursera and doing the homework assigments... but, on my own in python because Octave? Really?

DivineLib

Leaguesharp

Leaguesharp assemblies

mixcr

MiXCR is a universal software for fast and accurate analysis of T- and B- cell receptor repertoire sequencing data.

Nvidia-SlackBot

Slack chat bot for querying GPU jobs/status/ip

Parse_Decombinator

Parsing decombinator outputs

Spearmint

Spearmint Bayesian optimization codebase

zenbot

zenbot scripts