Derming123's repositories
2020_Wilk_COVID
Reproducibility repository accompanying Wilk, Rustagi, Zhao, et al. "A single-cell atlas of the peripheral immune response to severe COVID-19"
Beautiful-Visualization-with-R
《R语言数据可视化之美》配套代码
Cancer_Study
癌症相关学习内容
cesc
Single cell expression matrix for cesc
cytofkit
cytofkit: an integrated flow/mass cytometry data analysis pipeline
iCellR
Single (i) Cell R package (iCellR) is an interactive R package to work with high-throughput single cell sequencing technologies (i.e scRNA-seq, scVDJ-seq and CITE-seq).
Ligand-Receptor-Pairs
Compendium of available lists of ligand-receptor pairs and surface-secreted protein interactions.
NAFLD_computational_analysis
Matlab for lipid accumulation image analysis algorithm
nichenetr
NicheNet: predict active ligand-target links between interacting cells
Protocols-4pub
Multi-omics analysis protocols concluded by Lyu.
scCancer
A package for automated processing of single cell RNA-seq data in cancer
scFT-paper
Z Hu et al. The repertoire of serous ovarian cancer non-genetic heterogeneity revealed by single-cell sequencing of normal fallopian tube epithelial cells. Cancer Cell (2020). Volume 37, Issue 2, P226-242
scFunctions
Functions for single cell data analysis
SCORPIUS
Trajectory inference for single-cell RNA-seq
scRNA-seq-pipelines
Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"
scRNA-seq_notes
A list of scRNA-seq analysis tools
scRNA.seq.course
Analysis of single cell RNA-seq data course
scRNAseq-analysis-notes
scRNAseq analysis notes from Ming Tang
scTensor
R package for detection of cell-cell interaction using Non-negative Tensor Decomposition
spatial-datasets
overview of spatial datasets
study_R
Notes on using R
tenx
Pipelines for the analysis of 10x single-cell RNA-sequencing data
Tumor-Immune-Cell-Atlas
Code repository for the Tumor Immune Cell Atlas (TICA) project