Tiejunisdoingfine's repositories

sandres

SAnDReS (Statistical Analysis of Docking Results and Scoring functions) is a free and open-source (GNU General Public License) computational environment for the development of machine-learning models for the prediction of ligand-binding affinity. We developed SAnDReS using Python programming language, and SciPy, NumPy, scikit-learn, and Matplotlib libraries as a computational tool to explore the scoring function space.

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alphafold

Open source code for AlphaFold.

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alphafold3-pytorch

Implementation of Alphafold 3 in Pytorch

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biosimspace_tutorials

A tutorials suite for BioSimSpace.

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cleanrl

High-quality single file implementation of Deep Reinforcement Learning algorithms with research-friendly features (PPO, DQN, C51, DDPG, TD3, SAC, PPG)

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coding-interview-university

A complete computer science study plan to become a software engineer.

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DALLE2-pytorch

Implementation of DALL-E 2, OpenAI's updated text-to-image synthesis neural network, in Pytorch

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decision-transformer

Official codebase for Decision Transformer: Reinforcement Learning via Sequence Modeling.

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Deep-Reinforcement-Learning-Algorithms-with-PyTorch

PyTorch implementations of deep reinforcement learning algorithms and environments

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deepchem

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

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deeplearning-crypto

Evaluation of novel deep learning models for cryptocurrency price forecasting

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DMPfold

De novo protein structure prediction using iteratively predicted structural constraints

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DMPfold2

Fast and accurate protein structure prediction

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finetuna

Active Learning for Machine Learning Potentials

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hashlips_art_engine

HashLips Art Engine is a tool used to create multiple different instances of artworks based on provided layers.

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histone-mark-imputation

Repo for the histone imputation project.

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llama

Inference code for LLaMA models

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minGPT

A minimal PyTorch re-implementation of the OpenAI GPT (Generative Pretrained Transformer) training

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molearn

protein conformational spaces meet machine learning

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openfold

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

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openmm

OpenMM is a toolkit for molecular simulation using high performance GPU code.

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ProtMamba-ssm

ProtMamba: a homology-aware but alignment-free protein state space model

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Q-Value-RL

Q-Value (Reinforcement Learning) on Grid World

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reactfolio

Reactfolio is a sleek and responsive personal portfolio template built using React, perfect for showcasing your work and skills in a professional manner.

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RL_MFPT

Edina lab start excercise: fix the matlab code.

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rlkit

Collection of reinforcement learning algorithms

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time-series-forecasting-pytorch

Acquiring data from Alpha Vantage and predicting stock prices with PyTorch's LSTM

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