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DeniRibicic's repositories

Bash pipeline for analysis of ONT full-length 16S sequences in QIIME2

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A complete pipeline for metagenomic analysis

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Bash scripts for internal use

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fastq to polished sequenses: pipeline suitable for mixed samples and long (Nanopore) reads

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De novo assembler for single molecule sequencing reads using repeat graphs

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NanoCLUST is an analysis pipeline for UMAP-based classification of amplicon-based full-length 16S rRNA nanopore reads

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