readGeoMx error invalid 'row.names' length
RLau0 opened this issue · comments
To whom it may concern,
I am having issues with readGeoMx: I used the following code:
spe<-readGeoMx("Count.tsv","Sample_anno.tsv","Feature.tsv", NegProbeName = "NegProbe-WTX",
colnames.as.rownames =c("TargetName","SegmentDisplayName","TargetName"),
coord.colnames = c("ROICoordinateX", "ROICoordinateY"))
But it states the following error:
Error in .rowNamesDF<-
(x, value = value) : invalid 'row.names' length
The number of gene names and the order are the same for both the CountFile and the sampleAnnoFile. Furthermore, the number of samples and the order of the names are the same for the CountFile and sampleAnnoFile.
I am using R version 4.2.0 and StandR version 1.0.0 (installed from bioconductor last week)
Please can you advise on the matter. Thanks!
Have resolved by using R version 4.3.1 and standR v1.4.2