Daniel E. Weeks's repositories
Beamer-Rmd-Notes-Slides
A template for using R Markdown to create Beamer slides, with notes slides that can be easily included or excluded.
AlgorithmsFromTheBook.jl
Julia code in Kenneth Lange's Algorithms from THE BOOK
analysis_pipeline
TOPMed analysis pipeline
CDMS
A simulation of Joe Freedman's Cycloid Drawing Machine from Kickstarter, in Processing.JS
COVID-19
Links to COVID-19 information
dweeks
An R package with Dan Weeks' personal R code
ExampleData
Made-up data for use in our courses
genomics-r-intro
Intro to R and RStudio for Genomics
GWASTools
Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis
HuGen2071
HuGen 2071
HuGen2080
HuGen 2080 Statistical Genetics
mathart
Create mathematical art with R
MendelIHT.jl
Iterative hard thresholding as a multiple regression model for GWAS
New-Publications-Report
New Publications Report
NWS_WeatherShinyApp
Shiny app that graphs and presents the National Weather Service forecast
parameters
:bar_chart: Computation and processing of models' parameters
PedGFLMM
The PedGFLMM R package
PedGFLMM-simulation-code
PedGFLMM simulation code
S4Vectors
Foundation of vector-like and list-like containers in Bioconductor
vagrant-Ubuntu-R-RStudio-latex
Vagrant files to construct an Ubuntu virtual machine with RStudio, R, and LaTeX installed.