Daniel Bullock's repositories
OCT_scripts
Documented matlab code for processing Voxeleron OCT data and MAIA data
app-track_aLIC
Containerized app for tracking the anterior limb of the internal capsule (in humans)
citeas-on-requirements
GitHub action for using the CiteAs API to generate a software citation ACKNOWLEDGEMENTS.md document from requirements.txt
DanNBullock.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
USG_grants_crawl
An exploration of federal (and some non-federal) grant programs and awards relating to Open Science and Open Science Infrastructure, using data from grants.gov, NIH, NSF, DOE. Implemented in python & jupyter notebooks.
wma_pyTools
refactoring of wma_tools into python
2024-open-source-standards-workshop
The website for the workshop "An Open Source Model for Data/Metadata Standards", April 8-9, 2024
app-de-island_parcellation
Remove islands (unconnected components) from and/or inflate a given volumetric parcellation.
app-DIPY-connectome_and_WMC_from_parc
Generate a structural connectivity matrix and a White Matter Classification structure for a given parcellation and tractogram.
app-hcp-pipeline
brainlife wrapper for HCP Pipelines
app-tcks_to_tck_and_WMC
Simple converter for the multi-tck format, tcks, which combines these into a single tck file and produces an associated WMC file.
app-template-python
This is a template for a python-based brainlife.io/app
app-warp_refROI_to_subjSpace
A generic template app for warping a provided ROI (situated in a reference space) to a given subject space.
app-wma_pyTools-TractFigs
An app for generating multiple different kinds of figures from an input set of tracts (e.g as represented by a WMC object)
Auto-GPT
An experimental open-source attempt to make GPT-4 fully autonomous.
macapype
PNH segmentation pipelines based on nipype
NHPPipelines
Enhancements of HCP Pipelines for non-human primates
ontogpt-grants
GPT-based ontological extraction tools, including SPIRES, for assessing or categorizing Open-Science aspects of grants
projectTemplate
A template repository, with templated integration of hooks and actions
pysurferPlotting
Code for using pysurfer to plot