tophat2 is exactly the same source as tophat (just naming convention), so please use tophat (https://github.com/infphilo/tophat)
tophat2 is exactly the same source as tophat (just naming convention), so please use tophat (https://github.com/infphilo/tophat)
tophat2 is exactly the same source as tophat (just naming convention), so please use tophat (https://github.com/infphilo/tophat)
tophat2 is exactly the same source as tophat (just naming convention), so please use tophat (https://github.com/infphilo/tophat)
http://ccb.jhu.edu/software/tophat