DL42

DL42

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ParallelPopGen

This is a package of APIs for performing population genetics simulations and analyses in parallel on the GPU.

Language:CudaLicense:MITStargazers:9Issues:5Issues:1

SFS_DFE_categorical

Calculates the maximum likelihood DFE for a SFS (selected) based on the categorical distribution and a reference SFS (neutral)

Language:MATLABLicense:MITStargazers:1Issues:2Issues:0

3P_custom_synonymous

Custom Parallel PopGen Package for running simulations for power analysis in Drosophila synonymous site paper

Language:CudaLicense:MITStargazers:0Issues:2Issues:0

edge_algo

Random playing w/algorithms on edge tables

Language:C++Stargazers:0Issues:2Issues:0

fwdpp_experimental

Testing lab for ideas

Language:C++Stargazers:0Issues:2Issues:0

fwdpy11

Forward-time simulation in Python using fwdpp

Language:C++License:GPL-3.0Stargazers:0Issues:2Issues:0

fwdpy11_arg_example

Example of tracking the ARG during forward simulations. Implementation is a Python package using fwdpp, fwdpy11, msprime, and pybind11.

Language:PythonLicense:GPL-3.0Stargazers:0Issues:2Issues:0