Diagnostic Image Analysis Group's repositories
pathology-artifact-detection
Quality control of whole-slide images through multi-class semantic segmentation of artifacts
AbdomenMRUS-prostate-segmentation
Grand Challenge wrapper for whole-gland prostate segmentation with nnUNet
rse-panimg
Conversion of medical images to MHA and TIFF.
pathology-he-autoaugmetation
Comparative analysis of 4 state-of-the-art automatic augmentation algorithms in H&E stained histopathology.
picai_nndetection_semi_supervised_gc_algorithm
Semi-supervised nnDetection model for 3D csPCa detection/diagnosis in bpMRI, deployable on grand-challenge.org
picai_nnunet_gc_algorithm
nnUNet model for 3D csPCa detection/diagnosis in bpMRI, deployable on grand-challenge.org
pathology-streamingclam
Lightstream implementation of the StreamingCLAM model
picai_nndetection_gc_algorithm
nnDetection model for 3D csPCa detection/diagnosis in bpMRI, deployable on grand-challenge.org
picai_nnunet_semi_supervised_gc_algorithm
Semi-supervised nnUNet model for 3D csPCa detection/diagnosis in bpMRI, deployable on grand-challenge.org
SPIDER-Evaluation
Evaluation code used for the SPIDER Challenge.
CE-CT_PDAC_AutomaticDetection_nnUnet
Fully automtic pipeline for pancreatic ductal adenocarcinoma (PDAC) detection on contrast enhanced computed tomography (CE-CT) scans
albumentationsxl
Albumentations with Pyvips backend for large image augmentations
bodyct-alpaca-lora
Instruct-tune LLaMA on consumer hardware
bodyct-sybil-lung-cancer-risk
Fork of the original Sybil repo, with adjustments by Fennie van der Graaf
demo-challenge-pack
Challenge pack for the demo challenge
lightstream
A Pytorch Lightning implementation for streaming convolutional networks
oncology-ULS23
Forked repository of the Universal Lesion Segmentation Challenge '23
rse-docker-github-changelog-generator
Fork to allow local updating with up-to-date package versions
tiger_vuno_algorithm
Fork of the TIGER challenge winner repository