Simon Mathis's repositories
proteinmpnn_wrapper
A thin wrapper around ProteinMPNN for convenient sampling without having to write out or consume files
hydra_lightning_setup
A setup for using hydra and pytorch lightning.
ai4er-workshop-gis
2021 AI4ER workshop for the cohort currently in their MRes year.
Language:Jupyter Notebook000
ai4er-workshop-sql
2021 SQL workshop
000
Language:Jupyter NotebookMIT000
arxiv2notion
Chrome extension for clipping arXiv articles to Notion.
Language:JavaScriptMIT000
atom3d
ATOM3D: tasks on molecules in three dimensions
Language:PythonMIT000
Language:Jupyter Notebook000
alphafold3-pytorch
Implementation of Alphafold 3 in Pytorch
Language:PythonMIT000
biotite
A comprehensive library for computational molecular biology
Language:PythonBSD-3-Clause000
Language:Jupyter Notebook000
croydon-brixton.github.io
Personal website and blog
Language:SCSSMIT000
Language:PythonMIT000
graphein
Protein Graph Library
Language:Jupyter NotebookMIT000
plotstyle
For styling plots
Language:Jupyter NotebookMIT000
python-package-template
A template repo for Python packages
Language:PythonMIT000
000
rsd-engineeringcourse
Materials for Turing's Research Software Engineering course
Language:Jupyter NotebookNOASSERTION000
website
Content for the CaRAML website
Language:SCSS000