Computational Evolution Group

beast2

Bayesian Evolutionary Analysis by Sampling Trees

sampled-ancestors

This BEAST2 package provides MCMC proposals and post-processing tools for sampling trees containing sampled ancestors

CBAN

releases of beast2 packaged zip files in a reliable location

morph-models

Models for dealing with morphological data

BeastFX

GUIs for BEAST using Java FX to make things more pretty.

CCD

Conditional Clade Distribution package for BEAST 2

NZGOT

The toolkit to analyse various types of data collected from New Zealand Genomic Observatory project

beast2-site

beast2 web development site

beast3

beast2lang

A declarative statistical modelling language that uses fully-resolved BEAST2 class names

benchmark

BEAST benchmarking data

phylodynamics

For joint inference of genetic and epidemiological parameters. Repository has now moved to:

CCD-Research

Information, scripts and data of CCD research papers

compevol-slides

A repository of presentation materials for giving talks on computational evolution.

VCF2Patterns

BEAST.app

BEAST 2.7 package containing applications

beast1to2

Convert BEAST 1 XML for BEAST 2

beast2report

Test report

BeastFX3

beastlauncher

A general launcher utility for any main that wants to depend on local install of BEAST2 classes

beastshell

BeanShell scripting for BEAST2

Covid4Island

packages

Released BEAST 2 packages

testXXX

TTBSP

Materials for Taming the BEAST in the South Pacific

Waiheke2026

The 29th Annual New Zealand Phylogenomics Meeting