Computational Evolution Group

beast2

Bayesian Evolutionary Analysis by Sampling Trees

sampled-ancestors

This BEAST2 package provides MCMC proposals and post-processing tools for sampling trees containing sampled ancestors

CBAN

releases of beast2 packaged zip files in a reliable location

morph-models

Models for dealing with morphological data

BeastFX

GUIs for BEAST using Java FX to make things more pretty.

NZGOT

The toolkit to analyse various types of data collected from New Zealand Genomic Observatory project

beast2-site

beast2 web development site

benchmark

BEAST benchmarking data

phylodynamics

For joint inference of genetic and epidemiological parameters. Repository has now moved to:

compevol-slides

A repository of presentation materials for giving talks on computational evolution.

VCF2Patterns

BEAST.app

BEAST 2.7 package containing applications

beast1to2

Convert BEAST 1 XML for BEAST 2

beast2report

Test report

beastshell

BeanShell scripting for BEAST2

CCD

Conditinal Clade Distribution package for BEAST 2

Covid4Island

packages

Released BEAST 2 packages

testXXX

TTBSP

Materials for Taming the BEAST in the South Pacific