Christian's repositories
snakemake-lsf
Cookiecutter for snakemake LSF profile
ACEseqWorkflow
Allele-specific copy number estimation with whole genome sequencing
advanced_python_2019
Advanced Python Course 2019 - MoBi - Heidelberg
ale
Check syntax in Vim asynchronously and fix files, with Language Server Protocol (LSP) support
atacseq
ATAC-seq peak-calling, QC and differential analysis pipeline
bioconda-recipes
Conda recipes for the bioconda channel.
bsub
Send R code/R scripts/shell commands to LSF cluster without leaving R
cacoa
Single-cell Case Control Analysis
de.NBI-K8S-CloudUsermeeting
Hands-on examples for the K8S workshop at de.NBI Cloud Usermeeting 2021.
mitch
An R package for multi-dimensional pathway enrichment analysis
pySCTransform
Python package to perform normalization and variance-stabilization of single-cell data
python-restcountries
Python wrapper for http://restcountries.eu
rna-seq-star-deseq2
RNA-seq workflow using STAR and DESeq2
satisfactory-server-aws
Automated Satisfactory Dedicated Server management on AWS
scanpy_usage
Scanpy use cases.
snakemake
This is the development home of the workflow management system Snakemake. For general information, see
sparseMatrixStats
Implementation of the matrixStats API for sparse matrices