ChrisBotella's repositories
SamplingEffort
R code for the joint estimation of sampling effort and species distributions from species occurrences, a simulation example and application to Pl@ntNet data
UB-and-TGOB
Script for the simulation experiment of Botella et al. (2019) Bias in presence-only niche models related to sampling effort and species niches: lessons for background point selection
foodwebs_vs_land_use
R Scripts to reproduce results of "Signatures of land use intensity on european tetrapod food-web architectures"
GLC18
Reproducing GLC18 dataset from original GBIF occurrences
GPVDFR
Regression over longitudinal data : Penalized Functional Regression with Gaussian Process prior for functional variables
plectranthus_barbatus
This code reproduces the results from "Mechanistic-statistical modeling reveals the central role of human-mediated long-distance dispersal in plant invasion dynamics"
Simulate-local-trophic-networks
This simulation procedure aims at generating realized trophic networks in many local sites based on the definition of virtual species, their interactions and their environmental preferences.