ChenK19's repositories
pytorch-grad-cam
Advanced AI Explainability for computer vision. Support for CNNs, Vision Transformers, Classification, Object detection, Segmentation, Image similarity and more.
brain-segmentation-pytorch
U-Net implementation in PyTorch for FLAIR abnormality segmentation in brain MRI
BrainBERT
[ICLR 2023] Code for BrainBERT
Brant
Pre-trained Transformer on Brain Signals
CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
denoising-diffusion-pytorch
Implementation of Denoising Diffusion Probabilistic Model in Pytorch
DreamDiffusion
Implementation of “DreamDiffusion: Generating High-Quality Images from Brain EEG Signals”
EEG-DL
A Deep Learning library for EEG Tasks (Signals) Classification, based on TensorFlow.
EEG_Language_Alignment
Code for paper An Empirical Exploration of Cross-domain Alignment between Language and Electroencephalogram
FastSurfer
PyTorch implementation of FastSurferCNN
freesurfer
Neuroimaging analysis and visualization suite
GraphMAE
GraphMAE: Self-Supervised Masked Graph Autoencoders in KDD'22
kaldi
kaldi-asr/kaldi is the official location of the Kaldi project.
leaddbs
Lead-DBS is a scientific toolbox facilitating deep brain stimulation electrode locations and connectomic imaging.
LMFlow
An Extensible Toolkit for Finetuning and Inference of Large Foundation Models
mind-vis
Code base for MinD-Vis
moabb
Mother of All BCI Benchmarks
MONAI
AI Toolkit for Healthcare Imaging
nest-gpu
NEST GPU
Open3D
Open3D: A Modern Library for 3D Data Processing
OPSCEA
From the Kleen Lab at UCSF (http://kleen.ucsf.edu). Software for heatmaps of seizure activity projected onto reconstructed brains (Omni-Planar and Surface Casting of Epileptiform Activity). PAPER: https://doi.org/10.1111/epi.16841, VIDEO EXAMPLES: https://www.youtube.com/playlist?list=PLGmfrsRwdva-WKwqLyWwcZxE0f_MA9vIL
Pytorch-UNet
PyTorch implementation of the U-Net for image semantic segmentation with high quality images
SynthSeg
Contrast-agnostic segmentation of MRI scans
tensorpac
Phase-Amplitude Coupling under Python