Trevor Mugoya's repositories
AmpSeeker
Amplicon Sequencing snakemake workflow
BIOL-668-FINAL-PROJECT
Option 1.
BIOL668_Bioinformatics_Project
BIOL668 Bioinformatics Project.
BIOL_609_MIDTERM2
Write and files for Midterm 2 submission.
dna-seq-gatk-variant-calling
This Snakemake pipeline implements the GATK best-practices workflow
Introduction_To_Linux
Basic Introduction_To_Linux
Mini-PDB-Project
Scripts to read and extract specific information from a PDB file
Please-Contain-Yourself
A Docker tutorial written for people who don't actually know Docker already.
popgen-notes
Population genetics notes
primerDesignAg
Primer Design in Anopheles gambiae incorporating SNP variation
Python4Bioinformatics2019
Updated materials for MSc Bioinformatics for Pwani University
rna-seq-pop
Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
snakemake-workflow-template
A template for standard compliant snakemake-workflows
Mugoya_DNA_class_wizard
OOP homework for making classes (BIOL 668)
MUGOYA_python_project_part2
BIOL668 Python Project Part 2
snpArcher
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
VideoToText
A walkthrough of watson Speech to Text for video.