CapPow

collBook

collBook: Refine biological field observations

HerbASAP

An effort to automate image post processing for natural history collections

bcAudit

Headless barcode to filename verification program, to be linked to remote camera software for natural history specimen digitization workflows.

Plant-Digitization-Project

Plant Digitization Project -- Python Tkintering

pytesseract_text_bluring_example

An example of blurring text found in natural history specimen images.

audio_sifter

a quick UI for cleaning audio files for network training

CBAM

CBAM: Convolutional Block Attention Module for CIFAR10 on ResNet backbone with Pytorch

concept_vis

CLI tool for taxonomic concept visualization

data_cleaning_assignment

Midterm solution for Dr. Hong Qin's "Data Science for Biologists" course

digitization_rates_si

Supplimental information for: "The Estimation of Herbarium Specimen Digitization Rates: Accounting for Human Experience"

EulerX

Euler is an open source logic toolkit for aligning taxonomies and visualizing the results; see http://sysbio.oxfordjournals.org/cgi/reprint/syw023? ijkey=a0EkUEzzS2tpSL3&keytype=ref Demonstration videos are here: https://vimeo.com/126527661 and here: http://www2.cs.uic.edu/~tdang/ProvenanceMatrix/video.mp4

helloGIT

iDigBio_harvest_example

Example code for harvesting specimen images from iDigBio's python API

LNotes-Linked-Notes

Android app for easy document, management and retrieval

lsystem

An L-system add-on for blender

my-first-repo

Proof of progress in edx.org course "Microsoft+DEV275x+2T2018

ocrFilter

Identifying herbarium specimen images based on OCR filter terms

pd-project-xamarin

pd project mobile solution

Pusillum_complex_SI

Supplimental information documenting the cleaning and organization of Trillium pusillum complex occurrence records from multiple sources.

pyAudioClassification

🎶 dead simple audio classification

python-novice-inflammation

Software Carpentry introduction to Python for novices using inflammation data.

python_for_BGE_majors

Notebook materials for a BGE focused introduction to python

pyzbar

Read one-dimensional barcodes and QR codes from Python 2 and 3.

split_nfn_reconciled

A small notebook documenting the process used at UCHT for splitting Notes from Nature transcriptions by collection.

Subnautica_Reinforcement_Helper

An effort to expose Subnautica to reinforcement training agents

summer-18-m1

Assessment repo for module 1 of the edX course, Writing Professional Code, summer 2018 session.

Tax_Intel_Geo_Alignment

Preliminary analysis for geospatial disambiguation of allopatric species concepts

test_csv

TNRS

The Taxonomic Name Resolution Service is a free utility for correcting and standardizing plant names.

VARP_supplimental

Supplimental information documenting VARP method evaluation