Cameron T Ellis's repositories
brainiak
Brain Imaging Analysis Kit
infant_neuropipe-1
Neuropipe with specific scripts for analysing infant fMRI data collected with experiment_menu
brainiak-aperture
BrainIAK Aperture submission
experiment_menu
Repository for menu system to enable modular experiments to integrate behavioral, eye tracking and fMRI data collection
brainiak-tutorials
Tutorials that cover topics from basics to advanced fMRI analysis
event_related_fmri_tda
Repository for event-related fMRI simulation for testing Topological Data Analysis
fmrisim_validation_application
Repository for the validation and application of fmrisim. Code used in Ellis, Baldassano, Schapiro, Cai, & Cohen 2019
brainiak.github.io
http://brainiak.org
ANTs
Advanced Normalization Tools (ANTs)
yale-thesis
A LaTeX Class for typesetting a doctoral dissertation for the Yale University Graduate School of Arts and Sciences
brainiak-extras
Extensions for BrainIAK such as for Topological Data Analysis.