CSSFrancis

PyxemIUMAS

abtem-pyxem

4d_stem_clustering

Code for "Clustering Diffraction Vectors from Overlapping Structures in 4D STEM Data Sets"

empyer

Electron Microscopy tools for analyzing 4 and 5 dimensional datasets extension of hyperspy

hyperspy-presentation

A short presentation on using hyperspy using Jupyter-deck

kikuchipy

Processing, simulating and analyzing electron backscatter diffraction (EBSD) patterns in Python

361

abTEM

ab initio Transmission Electron Microscopy

Analysis

These are some of the notebooks and scripts that I have used for analysis mostly of metallic glasses

FEM-AngularCorrelations

hyperspy

Multidimensional data analysis

pyxem

pyXem (Pythonic Crystallographic (Electron) Microscopy) is an open-source Python library for crystallographic diffraction microscopy. Contact us: pyxem.team@gmail.com

CSSFrancis

diffsims

diffsims is an open-source python library for simulating diffraction.

exspy

hyperspy-website

HyperSpy website sources

hyperspy_gui_ipywidgets

ipywidgets GUI elements for HyperSpy

hyperspy_gui_traitsui

traitsui GUI elements for HyperSpy

Hyperspy_Workshop_2023

Notebooks used during the 2023 Hyperspy Workshop at ePSIC, Diamond Light Source.

Hyperspy_Workshop_2024

Notebooks used during the 2024 Hyperspy Workshop at ePSIC, Diamond Light Source.

lumispy

Luminescence data analysis with HyperSpy.

matplotlib

matplotlib: plotting with Python

orix

Analysing crystal orientations and symmetry in Python

pyxem-command

A bunch of scripts for running pyxem functions from the command line (mostly for processing data using SLURM or some other scheduler)

pyxem-demos

Tutorials and examples for pyXem (Pythonic Crystallographic Electron Microscopy), an open-source Python library for crystallographic electron microscopy. Contact us: pyxem.team@gmail.com

pyxem-feedstock

A conda-smithy repository for pyxem.

pyxem_template_matching_workflows

Reproducible workflows for template matching with Pyxem described in upcoming paper

rosettasciio

scikit-image

Image processing in Python

SymSim

This is just kind of a novelty project which I developed to help with understanding kinematic diffraction of symmetric clusters in glasses. It is kind of a rough treatment but still interesting to consider.