Giters
Computational Systems Biology (CSBiology)

Computational Systems Biology

CSBiology

Organization data from Github https://github.com/CSBiology

Computational Systems Biology

Location:Kaiserslautern

Home Page:https://csb.bio.uni-kl.de/

GitHub:@CSBiology

Twitter:@cs_biology

Computational Systems Biology's repositories

FSharp.FGL

Functional graph library for F#

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FSharpAux

Auxiliary functions and data structures for the F# programming language

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DynamicObj

F# library supporting Dynamic Objects including inheritance in functional style

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deepStabP

A small web ui and python api service to predict protein melting point temperatures.

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ProteomIQon

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CSBlog

The blog about all things CSB

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MzIO

Generic data model to unify various readers and writers for different formats used in protein mass spectrometry

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LitXml

Small FSharp based DSL for writing literal xml

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TMEA

Thermodynamically Motivated Enrichment Analysis (TMEA) is a new approach to gene set enrichment analysis.

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FS3

Access S3 storages from F# via AWS SDK

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FsDocker

F# Client for Docker Remote API based on Docker.DotNet Project

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YAMLicious

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BIO-BTE-06-L-7

Notebooks, scripts and guides for the computational section of VM 1/ VM 2: Practical class - Molecular Biotechnology II (BIO-BTE-06-L-7)

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iMLP

codebase and dotnet CLI tool for prediction of iMTS-Ls

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OBO.NET

An OBO file format parser, written in F#.

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Slurmi

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TempClass

Package for fitting and classification of short and noisy time series using constrained smoothing splines.

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BIO-MBP-06-U-2

Notebooks for the practical course

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csbiology.github.io

Website for teaching, publications and news from CSB (Computational Systems Biology)

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Drafo

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iMLP_Web

codebase of our webservice for prediction of iMTS-Ls

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BIO-BTE-10-L-4

Project suggestions for the project work for Wissenschaftliche Programmierung für Biolog*innen (BIO-BTE-10-L-4)

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FSharpSpreadsheetML

FSharp wrapper for Open XML SDK, allowing Excel File reading and manipulation

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FsODE

Ordinary Differential Equation (ODE) Models in F#

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ChlamyAtlas

Chlamy Atlas is a AI-powered web application which predicts the localizations of proteins from the Green Algae Chlamydomonas reinhardtii.

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.github

CSBiology gh organization repo (+discussions)

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BioInfoIntro

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Dash.NET.Template

dotnet new template to get started with Dash.NET

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FsOntology

A toolkit for working with ontology data structures in .NET

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OntologyEnrichment

Command line tool to perform functional annotation and ontology enrichments for Chlamydomonas and Arabidopsis

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