Cyril Pernet's repositories
Robust_Statistical_Toolbox
Robust_Statistical_Toolbox
brain_colours
colour map for brain imaging
ReproducibleQuantitativeDataScience
Post graduate course
Robust-Correlations
Robust Correlation Toolbox (a Matlab library)
MRI_FaceData_Wakeman-Henson
Various data analyses illustrated using public MRI data
stat_rethinking_2023
Statistical Rethinking Course for Jan-Mar 2023
AnalyzingNeuralTimeSeries
Code for ANTS book (Cohen, 2012, MIT Press)
bids-brain_tumours
template specification for brain tumour imaging using BIDS
bids-examples
A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
bids-extensions
BIDS Extension Proposal Docs
bids-matlab
MATLAB / Octave tools for BIDS datasets
bids-specification
Brain Imaging Data Structure (BIDS) Specification
bids-starter-kit
Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets
bids-website
Website for the Brain Imaging Data Structure standard.
CPernet.github.io
personal website: https://cpernet.github.io/
fs-docker
Dockerfiles for FreeSurfer
meta_meditation
raw metadata files, scripts and derived files for 'Mindfulness related changes in grey matter: A Systematic Review and Meta-analysis'
mffmatlabio
MFF Matlab file importer and exporter
MINDy
The up-to-date code for Mesoscale Individualized NeuroDynamic modeling and filtering
mml-book.github.io
Companion webpage to the book "Mathematics For Machine Learning"
OpenNeuroCount
simple script to analyze datasets count from OpenNeuro
Quicksheets
various cheatsheets for different coding languages
spm
SPM (Statistical Parametric Mapping)
spm12
Public Releases of SPM12 - see https://github.com/spm/spm for the Development Version
SPM_multimodal_segmentation
analysis of the multispectral segmentation
website
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