Buttonwood

assemblage

Tools for working with second gen assemblies, fasta sequences, etc

d3

A JavaScript visualization library for HTML and SVG.

LearningProcessing

A repo for examples from the book Learning Processing

bcbb

Incubator for useful bioinformatics code, primarily in Python and R

Bioinformatics

Useful scripts for NGS analysis

Bioinformatics-Training

Bioinformatics training resources

bokeh

Interactive Web Plotting for Python

c-recipes

c/c++ language useful recipes

cgdb-manual-in-chinese

《CGDB中文手册》

Countable

Countable is a JavaScript function to add live paragraph-, word- and character-counting to an HTML element.

datasharing

The Leek group guide to data sharing

datavjs

DataV

ggbio

Grid and ggplot2 based visualization for biological data

ggplot

ggplot for python

GoAgentX

GoAgentX 是一个在 Mac OS X 下使用代理服务的图形界面控制软件，方便一般用户在 Mac OS X 上配置和使用 goagent、west-chamber-season-3、SSH、stunnel 以及 shadowsocks。下载地址：https://github.com/ohdarling/GoAgentX/wiki

hexo-theme-chenall

一个模块化的hexo主题,

klib

A standalone and lightweight C library

miscperlscripts

Small collection of random useful perl scripts

octopress

Octopress is an obsessively designed framework for Jekyll blogging. It’s easy to configure and easy to deploy. Sweet huh?

pelican-fresh-demo

A static site generated by Pelican that demonstrates the Fresh theme.

raw

Raw - Sketch your data

rCharts_rickshaw_gettingstarted

real-time-cpp

Real-Time C++ Companion Code

rNVD3

Interactive Charts from R using NVD3.js

SeqPrep

Tool for stripping adaptors and/or merging paired reads with overlap into single reads.

Sibelia

Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.

SOAPdenovo2

Next generation sequencing reads de novo assembler.

sublime-jsdocs

Simplifies writing DocBlock comments in Javascript, PHP, CoffeeScript, Actionscript, C & C++

The-Nature-of-Code-Examples

Repository for example code from The Nature of Code book

vincent

A Python to Vega translator