Brain Dynamics Group

nftsim

C++ library for simulation of multiscale neural field dynamics

BrainVortexToolbox

NeuroPattToolbox

MATLAB toolbox to automatically detect, analyze and visualize spatiotemporal patterns in neural population activity, developed by Dr. Pulin Gong's group at University of Sydney

SpikeNet

A computational platform for studying spiking neural circuits developed by Dr. Pulin Gong's group at University of Sydney.

BrainPalimpsest

Matlab toolbox to deconvolve BOLD-fMRI data. It produces the underlying spatiotemporal neural and hemodynamic activity

braintrak

Real-time brain states tracking system and corticothalamic neural field parameter estimation

NeuroFdpToolbox

MATLAB toolbox to automatically detect, analyze and visualize spatiotemporal fractional propagating patterns in neural population activity, developed by Dr. Pulin Gong's group at University of Sydney

hemodynamics-layers

MATLAB codes for simulating spatiotemporal hemodynamic responses across the cortical depth

spikegrid

Spiking neural circuit models developed in Dr. Pulin Gong's group at University of Sydney

visbrain

A multi-purpose GPU-accelerated open-source suite for brain data visualization

conda-recipes

build and test recipes for conda

Distributed_and_dynamical_communication

Distributed and dynamical communication

FHMC

Fractional Neural Sampling

hctsa

Highly comparative time-series analysis code repository

MarmosetCortex

network analysis of marmoset connectivity data

PoleCalc

Project_ODOP

Pinwheel and patchy propagator. Neural activity, convolution of BOLD response, deconvolution of BOLD, neural activity recovery.

qtop

Simple queue status for pbs

spatiotemporal-urban-model

Model developed in the research carried out for "Spatiotemporal Dynamics of Urban Populations and Housing Markets", P. A. Robinson, A. McInnes, Somwrita Sarkar

SpecFac

Matlab implementation of Wilson Spectral Factorization