BioInf-Wuerzburg

BioInf-Wuerzburg's repositories

proovread

PacBio hybrid error correction through iterative short read consensus

Language:PerlMIT60 11 138

SeqFilter

Versatile FASTA/FASTQ sequence file analysis and modification tool

Language:PerlMIT9 7 10

perl5lib-Fasta

leightweight, oo-stlye FASTA modules

Language:PerlMIT2 6 1

perl5lib-Fastq

leightweight, oo-stlye FASTQ modules

Language:PerlMIT200

bwa

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

Language:CGPL-3.0100

prooveval

Language:Perl100

SeqChunker

efficiently split/sample from FASTA/FASTQ files on-the-fly

Language:Shell100

chloroExtractor

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ITS2database_update_2015

Scripts and data for ITS2 database update in 2015

Language:PerlMIT000

perl5lib-Jellyfish

Language:Perl000

perl5lib-Sam

Language:Perl000

perl5lib-Verbose

oo-style module to generate verbose messages and debug statements

Language:PerlMIT000

SeqStore

Random access to FASTA sequences. Stand-alone script and perl5lib. Based on Bio::DB::Fasta

Language:Perl000

perl5lib-Bowtie

Language:Perl000

perl5lib-Bowtie2

Language:Perl020

perl5lib-Cfg

Language:Perl000

perl5lib-Gmap

oo-style modules to parse gmap summary output

Language:Perl000

perl5lib-Kmer

Language:Perl000

perl5lib-PipeWrap

Language:Perl000