BioData.pt's repositories
beacon2-ri-api
About Beacon v2 Reference Implementation (API) deployed at Portugal. Base implementation by https://github.com/EGA-archive/beacon2-ri-api/
beacon-2.x-training-ui
Beaconv2 UI for the Portugal node.
indico-containers
Containerization of Indico
Beaconization-scripts
Scripts used to map data from XML file in NCBI to the BFF template (XLSX). To run: python3 mapXML2XLSX.py
Biome-Shiny
A Shiny R app for microbiome visualisation
D-cellerate
A Shiny app for analyzing and visualizing scRNA-seq data.
biodatapt-theme
A Drupal theme for the BioData.pt website based on Vartheme BS5
computational-tools-resources
Discover the resources that ELIXIR, the European bioinformatics infrastructure, has at your disposal to help you thorugh all phases of biological data gathering, analysis, and publication.
Ready4BioDataManagement
Ready for BioData Management? is a capacity-building program in data management for the life sciences to empower researchers and institutions in managing their data more effectively and efficiently.
docker-galaxy-compose
A basic galaxy container for docker-compose setups. Includes a conda installation.
wiki
BioData.pt Internal Wiki
FEGA-onboarding
Collection of onboarding materials for establishing a Federated EGA Node.
LocalEGA-code
A federated storage for sensitive data
ImpactAssessment
BioData.pt Workshop: Assessing the Impact of Research Activities
LateX-presentation-template
LateX Presentation Template based on Metropolis Beamer theme