Bio-bbhe's repositories
chroma
A generative model for programmable protein design
cluser_to_logo
Parse a SSN file and make sequence logo for each cluster
co-conservation
co-conservation analysis of sequence pairs
correlational-network
Codes for Correlational networking guides the discovery of cryptic natural product biosynthetic enzymes
dockstring
A Python package for molecular docking with an extensive, highly-curated dataset and a set of realistic benchmark tasks for drug discovery.
FrameDiPT
FrameDiPT: an SE(3) diffusion model for protein structure inpainting
github-slideshow
A robot powered training repository :robot:
mass_cal
monoisotopic mass calculation of modified peptides
matplotlib-multilayer-network
small template code to create a multilayer network using matplotlib and networkx
papers_for_protein_design_using_DL
List of papers about Proteins Design using Deep Learning
RFdiffusion
Code for running RFdiffusion
speco
Short Peptide and Enzyme Co-Occurrence analysis pipeline