Daniil Berezhnoi's repositories
Basic_Python_Stuff
Python tutorials in both Jupyter Notebook and youtube format.
Blog_article_TDWI_clustermap_and_hierarchichal_clustering
The notebook for the blog article on TDWI - February 2020
Ca_trace_analysis
Ca_traces - analysis/visualization pipeline
Machine-Learning-Datasets
Datasets mainly used for machine learning
phy
phy: interactive visualization and manual spike sorting of large-scale ephys data
PPSeq.jl
Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains
pySpinCapture-ReachOut
The program for ReachOut box - records high speed video (FLIR camera) and logs behavioral data (Arduino) from the reaching task with mice
Python-Image-Morpher
Python Image Morpher (PIM) is a program that blends images to your content!
Reaching_Task_VAI
This repository contains all the materials to build the mouse reaching task and analyze the data acquired with this task
ssm
Bayesian learning and inference for state space models
stats320-Linderman
STATS320: Statistical Methods for Neural Data Analysis
VideoPose3D
Efficient 3D human pose estimation in video using 2D keypoint trajectories
warhmm
WARHMM model for MoSeq
Yang_Chini_et_al
Code for Yang et al., 2P data