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Balharbi / rrbs-pipeline

A Snakemake pipeline for RRBS data analysis

Repository from Github https://github.comBalharbi/rrbs-pipelineRepository from Github https://github.comBalharbi/rrbs-pipeline

rrbs-pipeline

A Snakemake pipeline for RRBS data analysis

Overview

Rules DAG

Dependencies

  • snakemake
  • pyaml
  • r
  • methylkit
  • rtracklayer

About

A Snakemake pipeline for RRBS data analysis

License:GNU General Public License v3.0

Languages

Language:R 51.8%Language:Python 43.4%Language:Shell 4.8%