BIOP / EasyXT-FIJI

Commands and Classes for interfacing between Imaris and Fiji

BIOP/EasyXT-FIJI Issues

EasyXT.Dataset.addChannels() convert instead of making a copy
Updated 8 months ago
bring back resetImarisConnection()
Closed a year ago
Origin in ImageCalibration should be in pixel, not in micrometer
Updated a year ago
Migrate to Imaris 9.9 and update update site.
Updated 2 years ago
What the clipping plane !
Updated 2 years ago
openImage() bugs if ims file has (or not) objects (surfaces/spots)
Updated 2 years ago
Migrate Label Image Creation when Imaris 9.9 comes out
Updated 3 years ago
Look at timepoint issue
Updated 3 years ago
Issue with 2D images from Imaris
Closed 3 years ago9
make EasyXT.Surfaces.getLabelsImage() use IDs
Updated 3 years ago
Tracking Issue
Updated 3 years ago1
Surfaces.getLabelsImage() is no longer a label because of ImageConverter
Closed 3 years ago2
SpotsDetector parameters not being validated correctly
Updated 3 years ago3
EasyXT.getSpotsMask returns ImagePlus only 16-bit
Updated 4 years ago1
Filter Spots
Updated 4 years ago3
Reminder : make all example open their own imageplus and / or imaris dataset
Closed 4 years ago1
Filters API change suggestion
Updated 4 years ago2
Colors not updated
Updated 4 years ago
Compute Shortest Distance to Other Objects
Updated 4 years ago5
Add Child to Scene Index
Closed 4 years ago1
String aSurfaceFiltersString;
Closed 4 years ago9
Channel Index API change suggestion
Updated 4 years ago2
Results not ordered
Closed 4 years ago1
SpotsDetector : add the minimal amount of parameters in the builder initialization
Updated 4 years ago
Improve self-contained demos
Updated 4 years ago
setSurfaceMask only set the mask of the first timepoint
Updated 4 years ago
Check license for jar bundled from Imaris
Closed 4 years ago1
Do javadoc for demos
Updated 4 years ago
Reminder to remove errlog
Updated 4 years ago