Auke Haver's repositories
ZICRM-ASCA_plus
Zero-Inflated Count RM-ASCA+
Bioinformatics-Training
Bioinformatics training resources
Language:R000
Language:Jupyter NotebookGPL-3.0000
covariants
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
Language:PythonAGPL-3.0000
DeViVa
Scripts for analyzing SARS-CoV-2 variants
Language:Python000
kineticsTools
Tools for detecting DNA modifications from single molecule, real-time sequencing data
Language:Python000
pango-designation
Repository for suggesting new lineages that should be added to the current scheme
Language:PythonNOASSERTION000
pangolin-data
Repository for storing latest model, protobuf, designation hash and alias files for pangolin assignments
Language:PureBasicGPL-3.0000
salmonella_methylation_pipeline
SMP: A Salmonella Methylation analysis Pipeline
Language:PythonNOASSERTION000
ViralFlow
Workflow for SARS-CoV-2 genome Assembly at FioCruz/IAM
Language:Python000
WW_AMS_SC2
Wastewater monitoring of SARS-CoV-2 at Schiphol Airport
Language:REUPL-1.2000