Asude Berber's starred repositories
Deep_learning_examples
Examples of using deep learning in Bioinformatics
bioinformatics-projects
A Collection of Bioinformatics Projects
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
bioinformatics-projects
Projects for the course SDS 348/385 - Computational Biology and Bioinformatics
Statistical-Methods-and-Machine-Learning-in-R
This is an initiative to help understand Statistical methods and Machine learning in a naive manner. You will find scripts, and theoretical contents required to clarify concepts, especially for bio-informatic students.
Basic-Machine-Learning-for-Bioinformatics
ML course materials for bioinformatics students following the Basic Machine Learning for Bioinformatics course at Utrecht University. Course created and taught by Dieter Stoker.
LongRead_tutorials
Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data
Rosalind-1
Solutions to Rosalind Bioinformatics Problems
Genomics_withR
This is a repository used to create a book about genomic analysis with R
biojava-tutorial
:book::books:An introductory tutorial for BioJava
DataScience-Bioinformatics
Different tasks from the field of data science applied on typical bioinformatic data. Mainly used packages are numpy and scipy and the code is organized in jupyter notebooks.
Biodatascience101_notebooks
Biological data-science Jupyter notebooks designed for biodatascience101.github.io
appliedgenomics2018
Materials for Spring 2018 Applied Genomics Course
learn-python3
Jupyter notebooks for teaching/learning Python 3
sanbomics_scripts
scripts and notebooks from sanbomics
single-cell-bioinformatics
Course material in notebook format for learning about single cell bioinformatics methods
single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2020
Mathematics-for-Machine-Learning-and-Data-Science-Specialization-Coursera
Mathematics for Machine Learning and Data Science Specialization - Coursera - deeplearning.ai - solutions and notes
ml-for-genomics
Lists open source machine learning projects solving genomic or molecular biology problems.
comp-genomics-class
Code and examples for JHU Computational Genomics class
getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
genomicspapers
The Leek group guide to genomics papers
coursera-statistical-inference
Coursera's Statistical Inference Data Science course