Ashish438's repositories
Python-for-Bioinformatics
Python for Bioinformatics consist of a variety of python programmes,frequently used by bioinformaticians while handling biological data especially raw NGS data.
GitPractice
For practicing Git
allergen_predictor
This web app allows the user to enter a protein sequence and predicts whether that sequence is allergenic or non allergenic, with the help of classification algorithm that runs in the back end.
basesolve_assignemnt
Assignment given by basesolve
Automate-RNA-Seq-Pipeline
Automating the RNA Seq Data Analysis pipeline (TUXEDO Suite), consisting of tools FastQC, Cutadapt, Bowtie2, Tophat, Cufflinks, Cuffmerge and Cuffdiff for performing Differential Gene Expression Analysis using raw fastq data, annotation data and reference genome sequence.
Gene-Ontology-Enrichment
Gene Ontology Enrichment Analysis of genes for the terms Biological Process, Cellular Component, and Molecular Function. Gene Ontology Enrichment Analysis is a part of downstream analysis of Differential Gene Expression Analysis in RNA Seq and it is performed for annotating the differentially expressed genes that we get at the end of our DGE analysis.
Facebook_Automation
Automating posting on multiple groups on facebook using python
machine_learning_practice
Practicing basic ML algorithms on simple datasets
phylogenetics
A tutorial on making phylogenetic trees in python
Image_analysis
Analysis of histopathological cancer images which are in a very high resolution .svs format. It involves image manipulation and extraction of nuclear and cellular for automated detection of cancer
LifeCycleManuscript
Analyses for Plos Biology Rice Microbiome Manuscript