Zhaoren He (Arthurhe)

Arthurhe

Geek Repo

Company:UCSD

Location:La Jolla

Github PK Tool:Github PK Tool

Zhaoren He's repositories

NSB5_domain_caller

A domain caller working on HOMER tag directory of HiC, with a HiC matrix domain plotting tool

Language:RLicense:Apache-2.0Stargazers:5Issues:4Issues:0

scRNA_CD8T_Goldrath_Project

code for Goldrath lab paper

Language:Jupyter NotebookStargazers:2Issues:2Issues:1

Lightbulb

Single cell analysis suite

Language:RStargazers:1Issues:4Issues:0

biom262-2016

Code and notebooks for BIOM262

Language:Jupyter NotebookLicense:NOASSERTIONStargazers:0Issues:2Issues:0

cheatsheets

Quick lookup documents for commonly used tools

License:MITStargazers:0Issues:2Issues:0

ChIP-RNA-HiC-correlations

The project study how ChIP-RNA correlate with HiC

Language:RStargazers:0Issues:3Issues:0
Language:RStargazers:0Issues:0Issues:0

outrigger

Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data

Language:PythonLicense:BSD-3-ClauseStargazers:0Issues:2Issues:0

Riboprofiling_pipeline_Arthur

ribo profiling mapping pipeline

Language:ShellLicense:MITStargazers:0Issues:2Issues:0

RiboReadCountByFrame

Process Riboprofiling data for DE analysis

Language:Jupyter NotebookStargazers:0Issues:2Issues:0

scRNA_CD8T_Chang_Project

code for Chang lab paper

Stargazers:0Issues:2Issues:0
Language:Jupyter NotebookStargazers:0Issues:2Issues:0