AramDonyaee / ChEMBL-Explorer

Explore the ChEMBL platform and download customized bioactivity datasets

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ChEMBL Explorer

Explore the ChEMBL platform and download customized bioactivity datasets

Features

  • Search for diseases and genes in ChEMBL platform
  • See a summary of targets and bioactivity data available for your search query
  • Create a custom dataset by selecting your desired specific columns of bioactivity data
  • Download the dataset as a CSV file

Live Demo

Not only you can use this repo as a GUI in your local development enviroment, but a live demo is also available at https://chemblxplore.herokuapp.com

preview

Development

Want to contribute? That is so nice!

Step 1: Be sure that you use python version 3.7.10 and you have installed pip package manager properly

step 2: Install streamlit via this command

pip install streamlit

Step 3: Clone this repository

git clone https://github.com/AramDonyaee/ChEMBL-Explorer.git

Step 4: Download Miniconda for better development experience and virtual environment management from https://docs.conda.io/en/latest/miniconda.html

Step 5: Install Miniconda and launch Anaconda Propmt

Step 6: Navigate to the directory in which you have cloned this repository

Step 7: Create a virtual environment and then activate it:

conda create -n <your_environment_name> python=3.7.10
conda activate <your_environment_name>

Step 8: While you are in your activated conda environment run this command:

pip install -r requirements.txt

Step 9: After installing the requirements, navigate to my_component directory and use this command to run your stremlit app:

streamlit run Main.py

License

MIT

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Explore the ChEMBL platform and download customized bioactivity datasets

License:MIT License


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