SimonY's repositories
cnvkit
Copy number variant detection from targeted DNA sequencing
Code_snippets
A repo with random short code snippets
cs-video-courses
List of Computer Science courses with video lectures.
excelerate-scRNAseq
Single RNA-seq data analysis with R (Finland, May, 2019)
github_tutorial
basic git commands list!
jcolors
A set of color palettes I like (or can at least tolerate)
LandSCENT
Landscape Single Cell Entropy
Machine-Learning-CheatSheets
Cheatsheets for Numpy, Pandas, Matplotlib, Scipy, Scikit Learn, ggplot2, TensorFlow, Neural Networks, Keras, Deep Learning
methylseq
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
MyBooks
my books
NOMeSeq
The pipeline for NORM-Seq in tangfuchou lab for Epigenetic analysis.
python_for_data_analysis_2nd_chinese_version
《利用Python进行数据分析·第2版》
R_oop
:art: R语言面向对象编程教程 https://dataxujing.github.io/R_oop/
split_index
Demultiplexes a fastq.
ViewBS
ViewBS - a powerful toolkit for visualization of high-throughput bisulfite sequencing data