AlvaroDeleglise

shap

A game theoretic approach to explain the output of any machine learning model.

deeplearning-models

A collection of various deep learning architectures, models, and tips

Awesome-pytorch-list

A comprehensive list of pytorch related content on github,such as different models,implementations,helper libraries,tutorials etc.

Applied-Deep-Learning

Applied Deep Learning Course

deep-learning-book

Repository for "Introduction to Artificial Neural Networks and Deep Learning: A Practical Guide with Applications in Python"

course-content

NMA Computational Neuroscience course

deeptime

Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation

pycortex

Pycortex is a python-based toolkit for surface visualization of fMRI data

freesurfer

Neuroimaging analysis and visualization suite

stat453-deep-learning-ss21

STAT 453: Intro to Deep Learning @ UW-Madison (Spring 2021)

neurolib

Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿‍🔬

SynthSeg

Contrast-agnostic segmentation of MRI scans

visbrain

A multi-purpose GPU-accelerated open-source suite for brain data visualization

IDTxl

The Information Dynamics Toolkit xl (IDTxl) is a comprehensive software package for efficient inference of networks and their node dynamics from multivariate time series data using information theory.

neuromaps

A toolbox for comparing brain maps

abide

ABIDE Preprocessed Initiative

stat451-machine-learning-fs21

ENIGMA

The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠

python-ggseg

Python module for ggseg-like visualizations

parameter_efficiency_leaderboard

The most parameter efficient machine learning models on a few popular benchmarks

jqm_cvi

Small module with Cluster Validity Indexes (CVI)

cGCN_fMRI

Graph Convolution Network for fMRI Analysis Based on Connectivity Neighborhood

PyIF

An open source implementation to compute bi-variate Transfer Entropy.

null_models_net_neurosci

Null models in network neuroscience

validclust

Validate clustering results

dFC_DimReduction

leida-python

Leading Eigenvector Dynamics Analysis (LEiDA) Python Toolbox

Freesurfer

scripts for running freesurfer locally and extracting individual results

cs-video-courses

List of Computer Science courses with video lectures.

SynthSeg

Contrast-agnostic segmentation of MRI scans