Altius Institute for Biomedical Sciences

Altius Institute for Biomedical Sciences's repositories

Implementation of hotspot2 by Eric Rynes

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Methods and code for deriving an Index of DNaseI hypersensitive sites

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Soda plot gallery generator

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React web trace component for viewing ab1 files

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Efficient and fast storage and querying of pairwise score data for hypothesis testing

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Annotating the DHS Masterlist with Gencode and RepeatMasker

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Very rudimentary nodejs tabix service

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Code used to derive a regulatory Vocabulary of DHSs using NMF

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Ansible role for PostgreSQL

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Tools for fiberseq data written in rust.

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Compatibility wrappers for adapting SGE workflows to SLURM (via Matt Maurano, with local changes)

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Decision Tree Classifier and related aggregates (like Random Forests) meant for large yet sparse feature spaces

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