Alexhaoge / rCLIFII

rCLIFII: composite likelihood inference for individual identifications

rCLIFI

rCLIFII is an R package for analyzing animal individual identification data using the composite likelihood methods. Package features include simulation, nonparametric estimation of lagged identification rate and lagged association rate, maximum composite likelihood estimation, and model selection.

Installation

Install rCLIFII from Github:

install.packages('devtools')
devtools::install_github('Xuxl2020/rCLIFII')

or download source file and install locally

devtools::install_github('path/to/rCLIFII.tar.gz')

To check if rCLIFII is installed correctly, run:

library(rCLIFII)